CLUSTAL FORMAT for T-COFFEE Version_5.05 [http://www.tcoffee.org], CPU=0.24 sec, SCORE=78, Nseq=2, Len=470 Brisbane_2008_NA MNPNQKIITIGSISIAIGIISLMLQIGNIISIWASHSIQTGSQNNTGICNQRIITYENST California_SWINE_NA MNPNQKIITIGSVCMTIGMANLILQIGNIISIWISHSIQLGNQNQIETCNQSVITYENNT ************:.::**: .*:********** ***** *.**: *** :*****.* Brisbane_2008_NA WVNHTYVNINNTNVVAGEDKTSVTLAGNSSLCSISGWAIYTKDNSIRIGSKGDVFVIREP California_SWINE_NA WVNQTYVNISNTNFAAGQSVVSVKLAGNSSLCPVSGWAIYSKDNSVRIGSKGDVFVIREP ***:*****.***..**:. .**.********.:******:****:************** Brisbane_2008_NA FISCSHLECRTFFLTQGALLNDKHSNGTVKDRSPYRALMSCPLGEAPSPYNSKFESVAWS California_SWINE_NA FISCSPLECRTFFLTQGALLNDKHSNGTIKDRSPYRTLMSCPIGEVPSPYNSRFESVAWS ***** **********************:*******:*****:**.******:******* Brisbane_2008_NA ASACHDGMGWLTIGISGPDNGAVAVLKYNGIITGTIKSWKKQILRTQESECVCMNGSCFT California_SWINE_NA ASACHDGINWLTIGISGPDNGAVAVLKYNGIITDTIKSWRNNILRTQESECACVNGSCFT *******:.************************.*****:::*********.*:****** Brisbane_2008_NA IMTDGPSNKAASYKIFKIEKGKVTKSIELNAPNFHYEECSCYPDTGIVMCVCRDNWHGSN California_SWINE_NA VMTDGPSNGQASYKIFRIEKGKIVKSVEMNAPNYHYEECSCYPDSSEITCVCRDNWHGSN :******* ******:*****:.**:*:****:**********:. : *********** Brisbane_2008_NA RPWVSFNQNLDYQIGYICSGVFGDNPRPEDGEGSCNPVTVDGANGVKGFSYKYDNGVWIG California_SWINE_NA RPWVSFNQNLEYQIGYICSGIFGDNPRPNDKTGSCGPVSSNGANGVKGFSFKYGNGVWIG **********:*********:*******:* ***.**: :*********:**.****** Brisbane_2008_NA RTKSNRLRKGFEMIWDPNGWTNTDSDFSVKQDVVAITDWSGYSGSFVQHPELTGLDCIRP California_SWINE_NA RTKSISSRNGFEMIWDPNGWTGTDNNFSIKQDIVGINEWSGYSGSFVQHPELTGLDCIRP **** *:************.**.:**:***:*.*.:********************** Brisbane_2008_NA CFWVELVRGLPRENTTIWTSGSSISFCGVNSDTANWSWPDGAELPFT--- California_SWINE_NA CFWVELIRGRPKEN-TIWTSGSSISFCGVNSDTVGWSWPDGAELPFTIDK ******:** *:** ******************..************